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One component of the hr32 environment is an Apache Spark distribution. This can be used by packages such as hail and GATK to perform distributed data analysis. Note that while the Spark module is accessible from OOD, at the current time the distribution is intended for use on gadi.
Loading Spark
Spark version 3.1.2 is installed. Once the hr32 modules have been added to the module search path, spark can be added to your execution environment using:
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