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For most jobs, a limit of 1GB for the standard output and error streams is more than sufficient. If a job uses more than this limit, it is likely to be unintentional. An easy way to fix this is by modifying your job script to redirect the output of your program to a file in your /scratch space, for instance.
Example:
| Code Block |
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#Redirect# Redirect stdout and stderr to two separate files ./myprogram > /scratch/proj1/abc123/prog.out.${PBS_JOBID} 2> /scratch/proj1/abc123/prog.err.${PBS_JOBID} #Combine# Combine stdout and stderr and redirect to a file ./myprogram &> /scratch/proj1/abc123/prog.out.${PBS_JOBID} |
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